STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN03349.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
SEM52485.1
Cell surface protein SprA.
  
 
 0.999
SEN03364.1
Peptidase family C25.
 
   
 0.938
SEN03390.1
Gliding motility-associated lipoprotein GldJ.
 
     0.877
SEM59961.1
Penicillin-binding protein 2.
  
 0.858
SEN00082.1
Cell division protein FtsI (penicillin-binding protein 3).
  
 0.858
SEM99898.1
Cell division protein FtsQ.
 
 
 0.841
SEM14899.1
Protein of unknown function.
  
   
 0.812
SEM60225.1
Protein of unknown function.
  
     0.772
SEM78917.1
Outer membrane protein.
  
     0.771
SEM25457.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.764
Your Current Organism:
Chryseobacterium taichungense
NCBI taxonomy Id: 295069
Other names: C. taichungense, CCUG 50001, CIP 108519, Chryseobacterium taichungense Shen et al. 2005, DSM 17453, strain CC-TWGS1-8
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