STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG22473.1RasGEF domain protein. (1132 aa)    
Predicted Functional Partners:
KRG18465.1
Putative diguanylate cyclase.
    
 0.766
KRG18656.1
RasGEF domain protein.
  
     0.764
KRG22659.1
Sensory histidine kinase AtoS.
    
 0.755
tcrA
Transcriptional regulatory protein TcrA.
    
 0.737
KRG21297.1
Hypothetical protein.
    
 0.731
KRG22472.1
Hypothetical protein.
       0.727
KRG22621.1
RhoGAP domain protein.
  
     0.715
barA_2
Signal transduction histidine-protein kinase BarA.
    
 0.715
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
 
  0.708
KRG18474.1
Protein kinase domain protein.
  
     0.691
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.