STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG22574.1tRNA (guanine-N(7)-)-methyltransferase. (523 aa)    
Predicted Functional Partners:
prpE
Bis(5'-nucleosyl)-tetraphosphatase PrpE [asymmetrical].
   
   0.818
speE_1
Spermidine synthase.
 
     0.627
KRG18905.1
Von Willebrand factor type A domain protein.
    
  0.597
ubiB
Putative protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
    
 0.581
zraS_1
Sensor protein ZraS.
       0.536
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.536
KRG21305.1
Hypothetical protein.
    
 0.474
pcpB
Pentachlorophenol 4-monooxygenase.
  
 
  0.472
ubiI
2-octaprenylphenol hydroxylase.
  
 
  0.466
zraR_1
Transcriptional regulatory protein ZraR.
       0.442
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.