Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aceF | argH | HT99x_01492 | HT99x_00258 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Argininosuccinate lyase. | 0.758 |
aceF | ldh | HT99x_01492 | HT99x_01950 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.874 |
argG | argH | HT99x_00257 | HT99x_00258 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Argininosuccinate lyase. | 0.999 |
argG | argR | HT99x_00257 | HT99x_00253 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.933 |
argG | artP | HT99x_00257 | HT99x_00254 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Arginine-binding extracellular protein ArtP precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.824 |
argG | artQ | HT99x_00257 | HT99x_00255 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Arginine transport system permease protein ArtQ. | 0.823 |
argG | carB | HT99x_00257 | HT99x_01029 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.986 |
argG | glnQ_1 | HT99x_00257 | HT99x_00256 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Glutamine transport ATP-binding protein GlnQ. | 0.866 |
argG | lysA | HT99x_00257 | HT99x_00508 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.795 |
argG | rocD2 | HT99x_00257 | HT99x_01902 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Ornithine aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.930 |
argH | aceF | HT99x_00258 | HT99x_01492 | Argininosuccinate lyase. | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.758 |
argH | argG | HT99x_00258 | HT99x_00257 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.999 |
argH | argR | HT99x_00258 | HT99x_00253 | Argininosuccinate lyase. | Arginine repressor; Regulates arginine biosynthesis genes. | 0.935 |
argH | artP | HT99x_00258 | HT99x_00254 | Argininosuccinate lyase. | Arginine-binding extracellular protein ArtP precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.805 |
argH | artQ | HT99x_00258 | HT99x_00255 | Argininosuccinate lyase. | Arginine transport system permease protein ArtQ. | 0.816 |
argH | carB | HT99x_00258 | HT99x_01029 | Argininosuccinate lyase. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.831 |
argH | glnQ_1 | HT99x_00258 | HT99x_00256 | Argininosuccinate lyase. | Glutamine transport ATP-binding protein GlnQ. | 0.835 |
argH | ldh | HT99x_00258 | HT99x_01950 | Argininosuccinate lyase. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.672 |
argH | lysA | HT99x_00258 | HT99x_00508 | Argininosuccinate lyase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.763 |
argH | rocD2 | HT99x_00258 | HT99x_01902 | Argininosuccinate lyase. | Ornithine aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.957 |
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