STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fosAGlutathione transferase FosA. (142 aa)    
Predicted Functional Partners:
ascD
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
    
  0.818
gloA
Lactoylglutathione lyase.
  
 
 0.623
lly
4-hydroxyphenylpyruvate dioxygenase.
     
 0.620
KRG22404.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
   
 
  0.620
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.552
gabD
Succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family.
    
 0.552
KRG22196.1
Hypothetical protein.
    
  0.534
KRG22740.1
Hypothetical protein.
       0.513
KRG21997.1
Hypothetical protein.
    
  0.510
fdx_2
2Fe-2S ferredoxin.
    
  0.510
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
Server load: low (28%) [HD]