STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
estBCarboxylesterase 2. (229 aa)    
Predicted Functional Partners:
KRG22093.1
Frataxin-like protein; Belongs to the frataxin family.
  
    0.790
ypdA
Sensor histidine kinase YpdA.
       0.773
yopM
Outer membrane protein YopM.
  
 
  0.694
KRG22829.1
Leucine Rich repeats (2 copies).
  
 
  0.690
yehT
Transcriptional regulatory protein YehT.
       0.675
rutD
Putative aminoacrylate hydrolase RutD.
     
 0.653
KRG20799.1
OsmC-like protein.
     
 0.653
KRG22504.1
Alpha/beta hydrolase family protein.
     
 0.630
KRG21388.1
Hypothetical protein.
     
 0.630
KRG22090.1
Hypothetical protein.
 
     0.627
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.