STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21785.1Ankyrin repeats (3 copies). (1318 aa)    
Predicted Functional Partners:
KRG21631.1
Ankyrin repeats (3 copies).
  
     0.768
KRG18474.1
Protein kinase domain protein.
  
     0.698
KRG22710.1
Leucine Rich repeats (2 copies).
  
     0.688
KRG22621.1
RhoGAP domain protein.
  
     0.628
KRG20758.1
Ankyrin repeats (3 copies).
  
     0.626
KRG20657.1
Hypothetical protein.
  
     0.616
KRG22378.1
Protein kinase domain protein.
  
     0.607
KRG21298.1
Histone methylation protein DOT1.
  
     0.576
KRG20878.1
Long-chain-fatty-acid--AMP ligase FadD29.
    
 0.565
KRG20615.1
Ankyrin repeats (3 copies).
  
 
   0.536
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
Server load: low (28%) [HD]