STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21853.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
nfdA
N-substituted formamide deformylase precursor.
 
     0.698
KRG21844.1
FecR protein.
 
     0.577
KRG21694.1
Hypothetical protein.
  
     0.549
ppnK
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.519
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.519
adc
Putative acetoacetate decarboxylase.
  
     0.457
KRG17897.1
Alpha/beta hydrolase family protein.
  
     0.438
KRG22754.1
Hypothetical protein.
 
     0.431
cmpB
Bicarbonate transport system permease protein CmpB.
  
     0.430
KRG22005.1
Putative outer membrane efflux protein MdtP.
  
     0.407
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.