Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG20781.1 | KRG20782.1 | HT99x_01998 | HT99x_01999 | Hypothetical protein. | Putative DNA-binding transcriptional regulator. | 0.992 |
KRG20781.1 | KRG21877.1 | HT99x_01998 | HT99x_01071 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.837 |
KRG20781.1 | hipA_1 | HT99x_01998 | HT99x_02145 | Hypothetical protein. | Serine/threonine-protein kinase HipA. | 0.886 |
KRG20781.1 | hipA_2 | HT99x_01998 | HT99x_02584 | Hypothetical protein. | Serine/threonine-protein kinase HipA. | 0.889 |
KRG20782.1 | KRG20781.1 | HT99x_01999 | HT99x_01998 | Putative DNA-binding transcriptional regulator. | Hypothetical protein. | 0.992 |
KRG20782.1 | KRG21877.1 | HT99x_01999 | HT99x_01071 | Putative DNA-binding transcriptional regulator. | Helix-turn-helix domain protein. | 0.837 |
KRG21877.1 | KRG20781.1 | HT99x_01071 | HT99x_01998 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.837 |
KRG21877.1 | KRG20782.1 | HT99x_01071 | HT99x_01999 | Helix-turn-helix domain protein. | Putative DNA-binding transcriptional regulator. | 0.837 |
KRG21877.1 | KRG21878.1 | HT99x_01071 | HT99x_01072 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.497 |
KRG21877.1 | KRG21880.1 | HT99x_01071 | HT99x_01074 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.497 |
KRG21877.1 | hcpC_2 | HT99x_01071 | HT99x_01070 | Helix-turn-helix domain protein. | Putative beta-lactamase HcpC precursor. | 0.523 |
KRG21877.1 | hipA_1 | HT99x_01071 | HT99x_02145 | Helix-turn-helix domain protein. | Serine/threonine-protein kinase HipA. | 0.837 |
KRG21877.1 | hipA_2 | HT99x_01071 | HT99x_02584 | Helix-turn-helix domain protein. | Serine/threonine-protein kinase HipA. | 0.837 |
KRG21877.1 | queC | HT99x_01071 | HT99x_01073 | Helix-turn-helix domain protein. | 7-cyano-7-deazaguanine synthase. | 0.542 |
KRG21878.1 | KRG21877.1 | HT99x_01072 | HT99x_01071 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.497 |
KRG21878.1 | KRG21880.1 | HT99x_01072 | HT99x_01074 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KRG21878.1 | queC | HT99x_01072 | HT99x_01073 | Hypothetical protein. | 7-cyano-7-deazaguanine synthase. | 0.773 |
KRG21880.1 | KRG21877.1 | HT99x_01074 | HT99x_01071 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.497 |
KRG21880.1 | KRG21878.1 | HT99x_01074 | HT99x_01072 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KRG21880.1 | queC | HT99x_01074 | HT99x_01073 | Hypothetical protein. | 7-cyano-7-deazaguanine synthase. | 0.773 |
page 1 of 2