STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21934.1Ankyrin repeats (3 copies). (844 aa)    
Predicted Functional Partners:
KRG21933.1
Hypothetical protein.
       0.773
KRG20615.1
Ankyrin repeats (3 copies).
  
 
   0.762
KRG20493.1
Ankyrin repeats (3 copies).
  
     0.762
KRG20758.1
Ankyrin repeats (3 copies).
  
     0.741
KRG20953.1
Ankyrin repeats (3 copies).
  
     0.739
KRG20843.1
Ankyrin repeats (3 copies).
  
     0.729
KRG20598.1
Ankyrin repeats (3 copies).
  
     0.727
KRG20763.1
Ankyrin repeats (3 copies).
  
     0.723
KRG21928.1
Ankyrin repeats (3 copies).
  
     0.719
KRG20753.1
Ankyrin repeats (3 copies).
  
     0.715
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.