STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manC1_1Mannose-1-phosphate guanylyltransferase 1; Belongs to the mannose-6-phosphate isomerase type 2 family. (486 aa)    
Predicted Functional Partners:
algC
Phosphomannomutase/phosphoglucomutase.
 
 0.970
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
  
 
 0.936
pseB
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
  
 
 0.936
gmd_1
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.907
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.904
gtaB_1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.895
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.895
gmd_2
GDP-mannose 4,6-dehydratase.
  
 
 0.895
tuaD
UDP-glucose 6-dehydrogenase TuaD.
 
 
 0.892
KRG20315.1
Glycosyl transferases group 1.
 
 
 0.867
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.