Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRG21631.1Ankyrin repeats (3 copies). (680 aa)    
Predicted Functional Partners:
KRG21785.1
Ankyrin repeats (3 copies).
  
     0.768
KRG20615.1
Ankyrin repeats (3 copies).
  
 
   0.735
KRG20758.1
Ankyrin repeats (3 copies).
  
     0.699
KRG21928.1
Ankyrin repeats (3 copies).
  
     0.675
KRG22009.1
Ankyrin repeats (3 copies).
  
     0.639
KRG20493.1
Ankyrin repeats (3 copies).
  
     0.626
KRG21882.1
Ankyrin repeats (3 copies).
  
     0.614
KRG21632.1
Hypothetical protein.
       0.608
KRG22639.1
RasGEF domain protein.
  
     0.602
KRG22799.1
Ankyrin repeats (3 copies).
  
     0.594
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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