Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
KRG21361.1Protein kinase domain protein. (347 aa)    
Predicted Functional Partners:
KRG18465.1
Putative diguanylate cyclase.
   
 0.899
KRG22659.1
Sensory histidine kinase AtoS.
   
 0.891
tcrA
Transcriptional regulatory protein TcrA.
    
 0.877
KRG21297.1
Hypothetical protein.
    
 0.816
pleC
Non-motile and phage-resistance protein.
  
 
 0.802
barA_2
Signal transduction histidine-protein kinase BarA.
    
 0.768
barA_1
Signal transduction histidine-protein kinase BarA.
    
 0.767
divK_2
Polar-differentiation response regulator DivK.
    
 0.733
cph2_4
Phytochrome-like protein cph2.
    
 0.733
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
 
  0.729
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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