STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21078.1Protein kinase domain protein. (396 aa)    
Predicted Functional Partners:
KRG18465.1
Putative diguanylate cyclase.
    
 0.766
KRG22659.1
Sensory histidine kinase AtoS.
    
 0.755
KRG22602.1
Protein kinase domain protein.
  
  
  0.753
tcrA
Transcriptional regulatory protein TcrA.
    
 0.737
KRG21297.1
Hypothetical protein.
    
 0.731
prkC_1
Serine/threonine-protein kinase PrkC.
  
     0.720
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.719
barA_2
Signal transduction histidine-protein kinase BarA.
    
 0.715
prkC_3
Serine/threonine-protein kinase PrkC.
  
     0.710
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
  
 
  0.708
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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