STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21150.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
KRG21149.1
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.978
KRG22271.1
Hypothetical protein.
 
  
 0.910
KRG18442.1
Hypothetical protein.
 
  
 0.905
KRG20948.1
Hypothetical protein.
 
  
 0.854
KRG22270.1
Hypothetical protein.
 
  
 0.826
KRG22059.1
Hypothetical protein.
 
     0.786
KRG21148.1
Hypothetical protein.
       0.556
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.