STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21197.1AAA-like domain protein. (787 aa)    
Predicted Functional Partners:
KRG21198.1
Hypothetical protein.
   
 
 0.972
KRG21199.1
Hypothetical protein.
   
 
 0.965
KRG21213.1
Hypothetical protein.
   
 
 0.914
KRG21191.1
Hypothetical protein.
    
 
 0.899
pilT_2
Twitching mobility protein.
 
     0.823
KRG21193.1
Hypothetical protein.
  
     0.775
KRG21194.1
Hypothetical protein.
  
     0.775
KRG18451.1
Hypothetical protein.
  
     0.767
KRG18924.1
Hypothetical protein.
  
     0.763
KRG18909.1
Hypothetical protein.
  
     0.758
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.