STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sstTSerine/threonine transporter SstT; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (403 aa)    
Predicted Functional Partners:
gltP
Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.683
KRG22546.1
PAP2 superfamily protein.
  
     0.634
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit.
   
    0.585
KRG20935.1
L,D-transpeptidase catalytic domain.
       0.563
brnQ_1
Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.
  
   
 0.517
fadJ
Fatty acid oxidation complex subunit alpha; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.504
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.504
KRG20937.1
Hypothetical protein.
       0.475
yheS_1
Putative ABC transporter ATP-binding protein YheS.
       0.475
KRG21236.1
Sodium:neurotransmitter symporter family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
 0.470
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.