STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20957.1Acid-resistance membrane protein. (190 aa)    
Predicted Functional Partners:
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
       0.773
KRG20956.1
Hypothetical protein.
       0.558
apaG
CO2+/MG2+ efflux protein ApaG.
       0.529
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
       0.529
KRG20954.1
Hypothetical protein.
       0.521
KRG20955.1
Hypothetical protein.
       0.521
fadE_1
Acyl-coenzyme A dehydrogenase.
   
 
  0.470
acdA_1
Acyl-CoA dehydrogenase.
   
 
  0.470
mmgC
Acyl-CoA dehydrogenase.
   
 
  0.470
acdA_2
Acyl-CoA dehydrogenase.
   
 
  0.470
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.