STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG21015.1Pilus assembly protein, PilO. (202 aa)    
Predicted Functional Partners:
KRG21016.1
Fimbrial assembly protein (PilN).
 
 
 0.998
KRG21014.1
Pilus assembly protein, PilP.
 
 
 0.997
KRG21017.1
Competence protein A.
 
 
 0.993
pilQ
Type IV pilus biogenesis and competence protein PilQ precursor.
 
 
 0.992
KRG22017.1
LysM domain/BON superfamily protein.
  
 
   0.946
KRG22124.1
Hypothetical protein.
  
 
 0.913
KRG22306.1
Hypothetical protein.
 
   
 0.814
KRG22871.1
PilZ domain protein.
  
   
 0.803
KRG20435.1
Hypothetical protein.
  
  
 0.799
KRG22303.1
Neisseria PilC protein.
  
  
 0.784
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.