STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20836.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
KRG21636.1
Bacterial membrane flanked domain protein.
  
    0.661
KRG20966.1
SCO1/SenC.
  
     0.504
KRG20965.1
SURF1 family protein.
  
     0.493
KRG20837.1
Hypothetical protein.
       0.486
KRG22534.1
Hypothetical protein.
   
    0.485
btrV
Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family.
   
    0.485
KRG21489.1
STAS domain protein.
   
    0.485
KRG22304.1
Hypothetical protein.
  
     0.457
KRG22305.1
Hypothetical protein.
  
     0.455
KRG20835.1
Adenosine deaminase.
       0.434
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.