STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20657.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
KRG22710.1
Leucine Rich repeats (2 copies).
  
     0.775
KRG18474.1
Protein kinase domain protein.
  
     0.768
KRG21298.1
Histone methylation protein DOT1.
  
     0.759
KRG20758.1
Ankyrin repeats (3 copies).
  
     0.756
KRG20970.1
Synaptobrevin.
  
     0.748
KRG21292.1
Tubulin-tyrosine ligase family protein.
  
     0.695
htrA
Putative serine protease HtrA.
  
     0.661
KRG21934.1
Ankyrin repeats (3 copies).
  
     0.632
KRG21785.1
Ankyrin repeats (3 copies).
  
     0.616
KRG20493.1
Ankyrin repeats (3 copies).
  
     0.603
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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