STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaEPutative phospholipid ABC transporter permease protein MlaE. (262 aa)    
Predicted Functional Partners:
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
 0.999
mlaF
Putative phospholipid import ATP-binding protein MlaF.
 0.999
mlaC
Putative phospholipid-binding protein MlaC precursor.
 
 
 0.951
KRG20674.1
Hypothetical protein.
  
 0.933
KRG22534.1
Hypothetical protein.
 
 
  0.909
btrV
Putative anti-sigma factor antagonist BtrV; Belongs to the anti-sigma-factor antagonist family.
   
  0.885
KRG21489.1
STAS domain protein.
   
  0.885
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
  
  0.743
KRG20673.1
Hypothetical protein.
       0.737
lptA
Lipopolysaccharide export system protein LptA precursor.
 
     0.621
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.