STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20741.1Ankyrin repeats (3 copies). (349 aa)    
Predicted Functional Partners:
KRG21490.1
Ankyrin repeats (3 copies).
  
     0.730
KRG22671.1
Ankyrin repeats (3 copies).
  
     0.660
KRG21934.1
Ankyrin repeats (3 copies).
  
     0.647
KRG20763.1
Ankyrin repeats (3 copies).
  
     0.641
KRG22560.1
RasGEF domain protein.
  
     0.636
KRG20896.1
Ankyrin repeats (3 copies).
  
     0.629
KRG21928.1
Ankyrin repeats (3 copies).
  
     0.628
ankX_12
Phosphocholine transferase AnkX.
  
     0.591
KRG21699.1
Ankyrin repeats (3 copies).
  
     0.567
KRG20878.1
Long-chain-fatty-acid--AMP ligase FadD29.
    
 0.565
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.