Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mdtA_1Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (302 aa)    
Predicted Functional Partners:
KRG20485.1
FtsX-like permease family protein.
 
  
  0.957
KRG20486.1
Putative ABC transporter ATP-binding protein.
 
 
  0.886
tolC
Outer membrane protein TolC precursor.
  
 0.772
KRG22519.1
Outer membrane efflux protein.
  
  0.759
bepC
Outer membrane efflux protein BepC precursor.
   
  0.757
KRG20484.1
Hypothetical protein.
       0.752
macB
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.732
bepF_1
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.695
mdtA_2
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.658
oprM_2
Outer membrane protein OprM precursor.
  
  0.655
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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