Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KRG20517.1Methyltransferase domain protein. (271 aa)    
Predicted Functional Partners:
KRG20516.1
Hypothetical protein.
       0.773
cphA
Cyanophycin synthetase.
    
 0.772
KRG20878.1
Long-chain-fatty-acid--AMP ligase FadD29.
    
 0.760
pdhB_2
Pyruvate dehydrogenase E1 component subunit beta.
     
  0.481
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.453
KRG21966.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.453
aceF
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.445
KRG20519.1
Hypothetical protein.
       0.407
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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