Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
thiQThiamine import ATP-binding protein ThiQ. (249 aa)    
Predicted Functional Partners:
KRG20536.1
Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.988
KRG20630.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.938
KRG20628.1
ABC transporter substrate binding protein.
 
 
  0.854
KRG22465.1
ABC transporter substrate binding protein.
  
     0.771
KRG20534.1
Hypothetical protein.
       0.613
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.