Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
metQD-methionine-binding lipoprotein MetQ precursor; Belongs to the nlpA lipoprotein family. (265 aa)    
Predicted Functional Partners:
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
metI_1
D-methionine transport system permease protein MetI.
 0.999
metI_2
D-methionine transport system permease protein MetI.
 0.999
ugpQ
Glycerophosphoryl diester phosphodiesterase.
       0.596
sauU_4
Putative sulfoacetate transporter SauU.
       0.505
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
  
 0.466
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
     
  0.443
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
     
  0.443
KRG20486.1
Putative ABC transporter ATP-binding protein.
     
  0.443
addA
ATP-dependent helicase/nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
       0.438
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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