STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20409.1HDOD domain protein. (500 aa)    
Predicted Functional Partners:
tlyC
Hemolysin C.
 
     0.799
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.773
gsiD
Glutathione transport system permease protein GsiD.
       0.773
dppB
Dipeptide transport system permease protein DppB.
       0.610
hbpA
Heme-binding protein A precursor.
       0.610
KRG21489.1
STAS domain protein.
  
     0.506
KRG22303.1
Neisseria PilC protein.
  
     0.485
fabI_2
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI.
       0.481
KRG22659.1
Sensory histidine kinase AtoS.
 
 
   0.475
flgA
Flagella basal body P-ring formation protein FlgA precursor; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
     0.464
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.