STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20325.1Undecaprenyl-phosphate mannosyltransferase. (249 aa)    
Predicted Functional Partners:
KRG20326.1
UDP-glucose 4-epimerase.
 
 
  0.844
KRG20330.1
Putative S-adenosylmethionine-dependent methyltransferase/MSMEI2290.
     0.818
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
  
 0.520
rfbE_1
CDP-paratose 2-epimerase.
  
 
  0.509
rfbE_2
CDP-paratose 2-epimerase.
  
 
  0.502
KRG19771.1
Hypothetical protein.
 
     0.500
tagH
Teichoic acids export ATP-binding protein TagH.
 
  
 0.482
KRG22344.1
GtrA-like protein.
  
  
  0.469
KRG22499.1
Undecaprenyl-phosphate mannosyltransferase.
  
  
 
0.453
KRG20315.1
Glycosyl transferases group 1.
  
 
  0.420
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.