STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG20348.1N-glycosyltransferase. (317 aa)    
Predicted Functional Partners:
KRG20346.1
PGL/p-HBAD biosynthesis glycosyltransferase.
    
  0.633
KRG20347.1
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase.
    
  0.630
tagG
Teichoic acid translocation permease protein TagG.
 
  
 0.602
tuaC
Putative teichuronic acid biosynthesis glycosyltransferase TuaC.
  
    0.586
KRG20345.1
Glycogen synthase.
  
    0.586
KRG20343.1
Hypothetical protein.
       0.576
manC1_1
Mannose-1-phosphate guanylyltransferase 1; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.554
pseB
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
 
 
 0.547
tagO
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
    
 0.511
dnaX
DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
   0.503
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.