Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG18465.1 | KRG20298.1 | HT99x_02996 | HT99x_02690 | Putative diguanylate cyclase. | Hypothetical protein. | 0.611 |
KRG18465.1 | KRG22659.1 | HT99x_02996 | HT99x_00197 | Putative diguanylate cyclase. | Sensory histidine kinase AtoS. | 0.997 |
KRG18465.1 | ctaC | HT99x_02996 | HT99x_01881 | Putative diguanylate cyclase. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.505 |
KRG18465.1 | guaA_2 | HT99x_02996 | HT99x_03014 | Putative diguanylate cyclase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.874 |
KRG19176.1 | KRG20298.1 | HT99x_02835 | HT99x_02690 | Outer membrane efflux protein. | Hypothetical protein. | 0.786 |
KRG20233.1 | KRG20298.1 | HT99x_02625 | HT99x_02690 | Outer membrane efflux protein. | Hypothetical protein. | 0.786 |
KRG20298.1 | KRG18465.1 | HT99x_02690 | HT99x_02996 | Hypothetical protein. | Putative diguanylate cyclase. | 0.611 |
KRG20298.1 | KRG19176.1 | HT99x_02690 | HT99x_02835 | Hypothetical protein. | Outer membrane efflux protein. | 0.786 |
KRG20298.1 | KRG20233.1 | HT99x_02690 | HT99x_02625 | Hypothetical protein. | Outer membrane efflux protein. | 0.786 |
KRG20298.1 | KRG22005.1 | HT99x_02690 | HT99x_01199 | Hypothetical protein. | Putative outer membrane efflux protein MdtP. | 0.786 |
KRG20298.1 | KRG22069.1 | HT99x_02690 | HT99x_00486 | Hypothetical protein. | Cytochrome c5. | 0.722 |
KRG20298.1 | KRG22659.1 | HT99x_02690 | HT99x_00197 | Hypothetical protein. | Sensory histidine kinase AtoS. | 0.611 |
KRG20298.1 | ctaC | HT99x_02690 | HT99x_01881 | Hypothetical protein. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.830 |
KRG20298.1 | guaA_2 | HT99x_02690 | HT99x_03014 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.607 |
KRG20298.1 | tatB | HT99x_02690 | HT99x_00569 | Hypothetical protein. | Sec-independent protein translocase protein TatB. | 0.836 |
KRG20298.1 | tatC | HT99x_02690 | HT99x_00568 | Hypothetical protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.839 |
KRG22005.1 | KRG20298.1 | HT99x_01199 | HT99x_02690 | Putative outer membrane efflux protein MdtP. | Hypothetical protein. | 0.786 |
KRG22069.1 | KRG20298.1 | HT99x_00486 | HT99x_02690 | Cytochrome c5. | Hypothetical protein. | 0.722 |
KRG22069.1 | ctaC | HT99x_00486 | HT99x_01881 | Cytochrome c5. | Cytochrome c oxidase subunit 2 precursor; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.889 |
KRG22659.1 | KRG18465.1 | HT99x_00197 | HT99x_02996 | Sensory histidine kinase AtoS. | Putative diguanylate cyclase. | 0.997 |
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