STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG19191.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
KRG19190.1
Acetyltransferase.
       0.752
KRG19192.1
Zeta toxin.
       0.732
KRG19193.1
Putative multidrug export ATP-binding/permease protein.
       0.732
KRG19199.1
Acetyltransferase (GNAT) family protein.
 
  
  0.569
KRG19198.1
Acetyltransferase (GNAT) family protein.
 
  
  0.560
KRG19194.1
Acetyltransferase.
 
     0.503
KRG17371.1
Hypothetical protein.
  
     0.451
KRG21906.1
dephospho-CoA kinase/protein folding accessory domain-containing protein.
  
     0.432
glyQS
Glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.426
KRG19179.1
Hypothetical protein.
  
     0.413
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.