STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG19193.1Putative multidrug export ATP-binding/permease protein. (596 aa)    
Predicted Functional Partners:
KRG19192.1
Zeta toxin.
       0.773
KRG20878.1
Long-chain-fatty-acid--AMP ligase FadD29.
   
 0.756
KRG19191.1
Hypothetical protein.
       0.732
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.731
KRG19190.1
Acetyltransferase.
       0.711
apxIB_2
Toxin RTX-I translocation ATP-binding protein.
  
 
 
0.710
apxIB_1
Toxin RTX-I translocation ATP-binding protein.
  
 
 
0.705
ankX_9
Phosphocholine transferase AnkX.
  
 
  0.596
ankX_5
Phosphocholine transferase AnkX.
  
 
  0.594
KRG20615.1
Ankyrin repeats (3 copies).
  
 
  0.593
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.