STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG17718.1Acetyltransferase. (155 aa)    
Predicted Functional Partners:
KRG17717.1
TDP-fucosamine acetyltransferase.
 
     0.830
aroK_3
Shikimate kinase 1; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
     0.736
KRG17326.1
Hypothetical protein.
  
     0.448
KRG17715.1
Homoserine kinase.
       0.419
KRG22699.1
Serine/threonine protein kinase.
 
     0.416
tylM1
dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase.
       0.407
KRG22763.1
Acetyltransferase (GNAT) family protein.
  
     0.405
KRG17713.1
Phosphotransferase enzyme family protein.
  
    0.403
KRG17371.1
Hypothetical protein.
  
     0.402
KRG17710.1
Putative acetyltransferase.
    
  0.401
Your Current Organism:
Berkiella aquae
NCBI taxonomy Id: 295108
Other names: C. Berkiella aquae, Candidatus Berkiella aquae, Coxiellaceae bacterium HT99, Legionella-like amoebal pathogen HT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.