STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APJ08696.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)    
Predicted Functional Partners:
APJ09104.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.805
APJ08531.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.749
APJ08845.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.705
APJ08931.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.678
APJ08343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.579
APJ08695.1
3-methyladenine DNA glycosylase; Responsible for recognizing base lesions in the genome and initiating base excision DNA repair; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.
       0.544
nadE
NAD(+) synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD synthetase family.
       0.511
APJ08787.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.457
APJ08490.1
PTS glucose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.454
APJ08978.1
PTS mannose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.454
Your Current Organism:
Borreliella afzelii
NCBI taxonomy Id: 29518
Other names: ATCC 51567, B. afzelii, Borrelia afzelii, Borrelia afzeliusii, Borrellia group VS461, CIP 103469, DSM 10508, strain VS461
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.