STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APQ15550.1N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)    
Predicted Functional Partners:
APQ14964.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
APQ14925.1
Flagellar filament outsheath protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
APQ14926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
APQ15222.1
Export chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.772
APQ15551.1
Flagellar protein; Component of the outer layer of the flagella.
       0.662
APQ15552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
APQ14994.1
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.561
APQ15538.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.548
APQ14924.1
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.513
APQ15039.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.505
Your Current Organism:
Borreliella garinii
NCBI taxonomy Id: 29519
Other names: ATCC 51383, B. garinii, Borrelia garini, Borrelia garinii, Borrelia genomic group 20047, CIP 103362, DSM 10534, strain 20047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.