STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APQ15214.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
APQ15215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
APQ15213.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.738
APQ15210.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
       0.624
APQ15211.1
16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.624
APQ15212.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.624
APQ15208.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
lgt
EAL domain-containing protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.413
APQ15209.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
Your Current Organism:
Borreliella garinii
NCBI taxonomy Id: 29519
Other names: ATCC 51383, B. garinii, Borrelia garini, Borrelia garinii, Borrelia genomic group 20047, CIP 103362, DSM 10534, strain 20047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.