Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ41170.1 | SJZ41189.1 | SAMN02745171_00024 | SAMN02745171_00025 | MFS transporter, UMF1 family. | Hypothetical protein. | 0.737 |
SJZ41170.1 | SJZ41211.1 | SAMN02745171_00024 | SAMN02745171_00026 | MFS transporter, UMF1 family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.737 |
SJZ41189.1 | SJZ41170.1 | SAMN02745171_00025 | SAMN02745171_00024 | Hypothetical protein. | MFS transporter, UMF1 family. | 0.737 |
SJZ41189.1 | SJZ41211.1 | SAMN02745171_00025 | SAMN02745171_00026 | Hypothetical protein. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.773 |
SJZ41211.1 | SJZ41170.1 | SAMN02745171_00026 | SAMN02745171_00024 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | MFS transporter, UMF1 family. | 0.737 |
SJZ41211.1 | SJZ41189.1 | SAMN02745171_00026 | SAMN02745171_00025 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.773 |
SJZ41211.1 | SJZ47889.1 | SAMN02745171_00026 | SAMN02745171_00237 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.497 |
SJZ41211.1 | SJZ57893.1 | SAMN02745171_00026 | SAMN02745171_00521 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | ThiF family protein. | 0.437 |
SJZ41211.1 | SJZ88097.1 | SAMN02745171_00026 | SAMN02745171_01373 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.437 |
SJZ41211.1 | SJZ93651.1 | SAMN02745171_00026 | SAMN02745171_01548 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Phytoene desaturase. | 0.415 |
SJZ41211.1 | SJZ93770.1 | SAMN02745171_00026 | SAMN02745171_01551 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Squalene/phytoene synthase. | 0.623 |
SJZ41211.1 | ispH | SAMN02745171_00026 | SAMN02745171_01337 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.422 |
SJZ41211.1 | menA | SAMN02745171_00026 | SAMN02745171_01340 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.492 |
SJZ47889.1 | SJZ41211.1 | SAMN02745171_00237 | SAMN02745171_00026 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.497 |
SJZ47889.1 | SJZ88097.1 | SAMN02745171_00237 | SAMN02745171_01373 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.872 |
SJZ47889.1 | SJZ93651.1 | SAMN02745171_00237 | SAMN02745171_01548 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phytoene desaturase. | 0.422 |
SJZ47889.1 | SJZ93770.1 | SAMN02745171_00237 | SAMN02745171_01551 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Squalene/phytoene synthase. | 0.481 |
SJZ47889.1 | ispH | SAMN02745171_00237 | SAMN02745171_01337 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.484 |
SJZ57893.1 | SJZ41211.1 | SAMN02745171_00521 | SAMN02745171_00026 | ThiF family protein. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.437 |
SJZ57893.1 | SJZ88097.1 | SAMN02745171_00521 | SAMN02745171_01373 | ThiF family protein. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.437 |
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