Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ44066.1 | SJZ44108.1 | SAMN02745171_00126 | SAMN02745171_00128 | Endonuclease/Exonuclease/phosphatase family protein. | Spore maturation protein SpmA. | 0.477 |
SJZ44066.1 | SJZ44134.1 | SAMN02745171_00126 | SAMN02745171_00129 | Endonuclease/Exonuclease/phosphatase family protein. | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | 0.418 |
SJZ44066.1 | ybeY | SAMN02745171_00126 | SAMN02745171_00127 | Endonuclease/Exonuclease/phosphatase family protein. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.447 |
SJZ44108.1 | SJZ44066.1 | SAMN02745171_00128 | SAMN02745171_00126 | Spore maturation protein SpmA. | Endonuclease/Exonuclease/phosphatase family protein. | 0.477 |
SJZ44108.1 | SJZ44134.1 | SAMN02745171_00128 | SAMN02745171_00129 | Spore maturation protein SpmA. | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | 0.764 |
SJZ44108.1 | SJZ44179.1 | SAMN02745171_00128 | SAMN02745171_00130 | Spore maturation protein SpmA. | PD-(D/E)XK nuclease superfamily protein. | 0.715 |
SJZ44108.1 | SJZ44209.1 | SAMN02745171_00128 | SAMN02745171_00131 | Spore maturation protein SpmA. | CAAX protease self-immunity. | 0.751 |
SJZ44108.1 | SJZ47998.1 | SAMN02745171_00128 | SAMN02745171_00242 | Spore maturation protein SpmA. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.432 |
SJZ44108.1 | SJZ58353.1 | SAMN02745171_00128 | SAMN02745171_00537 | Spore maturation protein SpmA. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.560 |
SJZ44108.1 | SJZ63062.1 | SAMN02745171_00128 | SAMN02745171_00687 | Spore maturation protein SpmA. | Carboxynorspermidine decarboxylase. | 0.447 |
SJZ44108.1 | SJZ64370.1 | SAMN02745171_00128 | SAMN02745171_00701 | Spore maturation protein SpmA. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.455 |
SJZ44108.1 | ribBA | SAMN02745171_00128 | SAMN02745171_01546 | Spore maturation protein SpmA. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.455 |
SJZ44108.1 | ybeY | SAMN02745171_00128 | SAMN02745171_00127 | Spore maturation protein SpmA. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.776 |
SJZ44134.1 | SJZ44066.1 | SAMN02745171_00129 | SAMN02745171_00126 | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | Endonuclease/Exonuclease/phosphatase family protein. | 0.418 |
SJZ44134.1 | SJZ44108.1 | SAMN02745171_00129 | SAMN02745171_00128 | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | Spore maturation protein SpmA. | 0.764 |
SJZ44134.1 | SJZ44179.1 | SAMN02745171_00129 | SAMN02745171_00130 | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | PD-(D/E)XK nuclease superfamily protein. | 0.697 |
SJZ44134.1 | SJZ44209.1 | SAMN02745171_00129 | SAMN02745171_00131 | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | CAAX protease self-immunity. | 0.697 |
SJZ44134.1 | ybeY | SAMN02745171_00129 | SAMN02745171_00127 | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.726 |
SJZ44179.1 | SJZ44108.1 | SAMN02745171_00130 | SAMN02745171_00128 | PD-(D/E)XK nuclease superfamily protein. | Spore maturation protein SpmA. | 0.715 |
SJZ44179.1 | SJZ44134.1 | SAMN02745171_00130 | SAMN02745171_00129 | PD-(D/E)XK nuclease superfamily protein. | Peptidyl-dipeptidase Dcp. Metallo peptidase. MEROPS family M03A. | 0.697 |
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