STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ67363.1DNA polymerase-3 subunit delta'. (385 aa)    
Predicted Functional Partners:
SJZ69512.1
DNA polymerase-3 subunit beta.
 
 
 0.980
SJZ90274.1
DNA polymerase III, delta subunit.
 
 
 0.979
SJZ48125.1
DNA polymerase III, alpha subunit.
  
 0.975
SJZ69532.1
DNA polymerase-3 subunit epsilon.
  
 0.968
dnaX
DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 
0.873
SJZ60572.1
Hypothetical protein.
   
 0.832
SJZ52876.1
Single-strand DNA-binding protein.
    
 
 0.819
SJZ82916.1
Protein of unknown function.
    
 
 0.759
SJZ77187.1
DNA-binding transcriptional regulator, MerR family.
    
  0.673
SJZ71640.1
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 
 
 0.671
Your Current Organism:
Porphyromonas circumdentaria
NCBI taxonomy Id: 29524
Other names: ATCC 51356, CCUG 41934, JCM 13864, NCTC 12469, P. circumdentaria, VPB 3329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.