Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ82916.1 | SJZ82978.1 | SAMN02745171_01237 | SAMN02745171_01239 | Protein of unknown function. | PAS domain S-box-containing protein. | 0.568 |
SJZ82916.1 | SJZ82995.1 | SAMN02745171_01237 | SAMN02745171_01240 | Protein of unknown function. | Hypothetical protein. | 0.504 |
SJZ82916.1 | SJZ83013.1 | SAMN02745171_01237 | SAMN02745171_01241 | Protein of unknown function. | Mannose-6-phosphate isomerase, type 1. | 0.502 |
SJZ82916.1 | rlmH | SAMN02745171_01237 | SAMN02745171_01238 | Protein of unknown function. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.703 |
SJZ82916.1 | trpS | SAMN02745171_01237 | SAMN02745171_01236 | Protein of unknown function. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.726 |
SJZ82978.1 | SJZ82916.1 | SAMN02745171_01239 | SAMN02745171_01237 | PAS domain S-box-containing protein. | Protein of unknown function. | 0.568 |
SJZ82978.1 | SJZ82995.1 | SAMN02745171_01239 | SAMN02745171_01240 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.749 |
SJZ82978.1 | SJZ83013.1 | SAMN02745171_01239 | SAMN02745171_01241 | PAS domain S-box-containing protein. | Mannose-6-phosphate isomerase, type 1. | 0.699 |
SJZ82978.1 | rlmH | SAMN02745171_01239 | SAMN02745171_01238 | PAS domain S-box-containing protein. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.635 |
SJZ82978.1 | trpS | SAMN02745171_01239 | SAMN02745171_01236 | PAS domain S-box-containing protein. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.512 |
SJZ82995.1 | SJZ82916.1 | SAMN02745171_01240 | SAMN02745171_01237 | Hypothetical protein. | Protein of unknown function. | 0.504 |
SJZ82995.1 | SJZ82978.1 | SAMN02745171_01240 | SAMN02745171_01239 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.749 |
SJZ82995.1 | SJZ83013.1 | SAMN02745171_01240 | SAMN02745171_01241 | Hypothetical protein. | Mannose-6-phosphate isomerase, type 1. | 0.689 |
SJZ82995.1 | rlmH | SAMN02745171_01240 | SAMN02745171_01238 | Hypothetical protein. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.575 |
SJZ82995.1 | trpS | SAMN02745171_01240 | SAMN02745171_01236 | Hypothetical protein. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.447 |
SJZ83013.1 | SJZ82916.1 | SAMN02745171_01241 | SAMN02745171_01237 | Mannose-6-phosphate isomerase, type 1. | Protein of unknown function. | 0.502 |
SJZ83013.1 | SJZ82978.1 | SAMN02745171_01241 | SAMN02745171_01239 | Mannose-6-phosphate isomerase, type 1. | PAS domain S-box-containing protein. | 0.699 |
SJZ83013.1 | SJZ82995.1 | SAMN02745171_01241 | SAMN02745171_01240 | Mannose-6-phosphate isomerase, type 1. | Hypothetical protein. | 0.689 |
SJZ83013.1 | rlmH | SAMN02745171_01241 | SAMN02745171_01238 | Mannose-6-phosphate isomerase, type 1. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.564 |
SJZ83013.1 | trpS | SAMN02745171_01241 | SAMN02745171_01236 | Mannose-6-phosphate isomerase, type 1. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.439 |
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