Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ54182.1 | SJZ58353.1 | SAMN02745171_00429 | SAMN02745171_00537 | IMP dehydrogenase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.505 |
SJZ54182.1 | SJZ66443.1 | SAMN02745171_00429 | SAMN02745171_00780 | IMP dehydrogenase. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.923 |
SJZ54182.1 | SJZ89793.1 | SAMN02745171_00429 | SAMN02745171_01422 | IMP dehydrogenase. | Dipeptidyl-peptidase-4. | 0.535 |
SJZ54182.1 | SJZ97583.1 | SAMN02745171_00429 | SAMN02745171_01669 | IMP dehydrogenase. | Phosphoribosylformylglycinamidine synthase. | 0.939 |
SJZ54182.1 | murI | SAMN02745171_00429 | SAMN02745171_01420 | IMP dehydrogenase. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.707 |
SJZ58353.1 | SJZ54182.1 | SAMN02745171_00537 | SAMN02745171_00429 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | IMP dehydrogenase. | 0.505 |
SJZ58353.1 | SJZ97583.1 | SAMN02745171_00537 | SAMN02745171_01669 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Phosphoribosylformylglycinamidine synthase. | 0.529 |
SJZ58353.1 | ddl | SAMN02745171_00537 | SAMN02745171_01719 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.977 |
SJZ58353.1 | murD | SAMN02745171_00537 | SAMN02745171_00278 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.947 |
SJZ58353.1 | murE | SAMN02745171_00537 | SAMN02745171_01246 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.987 |
SJZ58353.1 | murI | SAMN02745171_00537 | SAMN02745171_01420 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.558 |
SJZ66443.1 | SJZ54182.1 | SAMN02745171_00780 | SAMN02745171_00429 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | IMP dehydrogenase. | 0.923 |
SJZ66443.1 | murD | SAMN02745171_00780 | SAMN02745171_00278 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.440 |
SJZ66443.1 | murI | SAMN02745171_00780 | SAMN02745171_01420 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.924 |
SJZ89699.1 | SJZ89762.1 | SAMN02745171_01419 | SAMN02745171_01421 | Hypothetical protein. | Heat shock protein HslJ. | 0.427 |
SJZ89699.1 | murI | SAMN02745171_01419 | SAMN02745171_01420 | Hypothetical protein. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.526 |
SJZ89762.1 | SJZ89699.1 | SAMN02745171_01421 | SAMN02745171_01419 | Heat shock protein HslJ. | Hypothetical protein. | 0.427 |
SJZ89762.1 | SJZ89793.1 | SAMN02745171_01421 | SAMN02745171_01422 | Heat shock protein HslJ. | Dipeptidyl-peptidase-4. | 0.584 |
SJZ89762.1 | murI | SAMN02745171_01421 | SAMN02745171_01420 | Heat shock protein HslJ. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.634 |
SJZ89793.1 | SJZ54182.1 | SAMN02745171_01422 | SAMN02745171_00429 | Dipeptidyl-peptidase-4. | IMP dehydrogenase. | 0.535 |
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