Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ52915.1 | SJZ54182.1 | SAMN02745171_00384 | SAMN02745171_00429 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | IMP dehydrogenase. | 0.536 |
SJZ52915.1 | SJZ66526.1 | SAMN02745171_00384 | SAMN02745171_00783 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Putative hydrolase of the HAD superfamily. | 0.431 |
SJZ52915.1 | SJZ90265.1 | SAMN02745171_00384 | SAMN02745171_01442 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | AMP nucleosidase. | 0.844 |
SJZ54182.1 | SJZ52915.1 | SAMN02745171_00429 | SAMN02745171_00384 | IMP dehydrogenase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.536 |
SJZ54182.1 | SJZ66526.1 | SAMN02745171_00429 | SAMN02745171_00783 | IMP dehydrogenase. | Putative hydrolase of the HAD superfamily. | 0.708 |
SJZ54182.1 | SJZ90265.1 | SAMN02745171_00429 | SAMN02745171_01442 | IMP dehydrogenase. | AMP nucleosidase. | 0.463 |
SJZ54182.1 | luxS | SAMN02745171_00429 | SAMN02745171_00976 | IMP dehydrogenase. | S-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (AI-2) synthesis protein LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.433 |
SJZ54182.1 | metG | SAMN02745171_00429 | SAMN02745171_00590 | IMP dehydrogenase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.797 |
SJZ54182.1 | nadE | SAMN02745171_00429 | SAMN02745171_01192 | IMP dehydrogenase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.498 |
SJZ66526.1 | SJZ52915.1 | SAMN02745171_00783 | SAMN02745171_00384 | Putative hydrolase of the HAD superfamily. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.431 |
SJZ66526.1 | SJZ54182.1 | SAMN02745171_00783 | SAMN02745171_00429 | Putative hydrolase of the HAD superfamily. | IMP dehydrogenase. | 0.708 |
SJZ66526.1 | SJZ90265.1 | SAMN02745171_00783 | SAMN02745171_01442 | Putative hydrolase of the HAD superfamily. | AMP nucleosidase. | 0.441 |
SJZ90208.1 | SJZ90254.1 | SAMN02745171_01438 | SAMN02745171_01441 | ABC-2 type transport system permease protein. | Type I restriction enzyme R protein N terminus (HSDR_N). | 0.599 |
SJZ90208.1 | SJZ90265.1 | SAMN02745171_01438 | SAMN02745171_01442 | ABC-2 type transport system permease protein. | AMP nucleosidase. | 0.442 |
SJZ90208.1 | SJZ90274.1 | SAMN02745171_01438 | SAMN02745171_01443 | ABC-2 type transport system permease protein. | DNA polymerase III, delta subunit. | 0.446 |
SJZ90208.1 | SJZ90284.1 | SAMN02745171_01438 | SAMN02745171_01444 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.415 |
SJZ90254.1 | SJZ90208.1 | SAMN02745171_01441 | SAMN02745171_01438 | Type I restriction enzyme R protein N terminus (HSDR_N). | ABC-2 type transport system permease protein. | 0.599 |
SJZ90254.1 | SJZ90265.1 | SAMN02745171_01441 | SAMN02745171_01442 | Type I restriction enzyme R protein N terminus (HSDR_N). | AMP nucleosidase. | 0.597 |
SJZ90254.1 | SJZ90274.1 | SAMN02745171_01441 | SAMN02745171_01443 | Type I restriction enzyme R protein N terminus (HSDR_N). | DNA polymerase III, delta subunit. | 0.865 |
SJZ90254.1 | SJZ90284.1 | SAMN02745171_01441 | SAMN02745171_01444 | Type I restriction enzyme R protein N terminus (HSDR_N). | Hypothetical protein. | 0.536 |
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