Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEW04815.1 | SEW10854.1 | SAMN04488122_0357 | SAMN04488122_0638 | GH3 auxin-responsive promoter. | Methyltransferase domain-containing protein. | 0.425 |
| SEW10854.1 | SEW04815.1 | SAMN04488122_0638 | SAMN04488122_0357 | Methyltransferase domain-containing protein. | GH3 auxin-responsive promoter. | 0.425 |
| SEW10854.1 | SEW10871.1 | SAMN04488122_0638 | SAMN04488122_0639 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.456 |
| SEW10854.1 | SEW22245.1 | SAMN04488122_0638 | SAMN04488122_1243 | Methyltransferase domain-containing protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.615 |
| SEW10854.1 | SEW33612.1 | SAMN04488122_0638 | SAMN04488122_1990 | Methyltransferase domain-containing protein. | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | 0.416 |
| SEW10854.1 | SEW53801.1 | SAMN04488122_0638 | SAMN04488122_5689 | Methyltransferase domain-containing protein. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.495 |
| SEW10854.1 | SEW54810.1 | SAMN04488122_0638 | SAMN04488122_6202 | Methyltransferase domain-containing protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.577 |
| SEW10854.1 | bioB | SAMN04488122_0638 | SAMN04488122_5341 | Methyltransferase domain-containing protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.438 |
| SEW10854.1 | gcvP | SAMN04488122_0638 | SAMN04488122_6125 | Methyltransferase domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.651 |
| SEW10854.1 | hisI | SAMN04488122_0638 | SAMN04488122_6245 | Methyltransferase domain-containing protein. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.411 |
| SEW10871.1 | SEW10854.1 | SAMN04488122_0639 | SAMN04488122_0638 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.456 |
| SEW22245.1 | SEW10854.1 | SAMN04488122_1243 | SAMN04488122_0638 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Methyltransferase domain-containing protein. | 0.615 |
| SEW22245.1 | gcvP | SAMN04488122_1243 | SAMN04488122_6125 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.492 |
| SEW33612.1 | SEW10854.1 | SAMN04488122_1990 | SAMN04488122_0638 | ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. | Methyltransferase domain-containing protein. | 0.416 |
| SEW53801.1 | SEW10854.1 | SAMN04488122_5689 | SAMN04488122_0638 | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | Methyltransferase domain-containing protein. | 0.495 |
| SEW53801.1 | SEW54810.1 | SAMN04488122_5689 | SAMN04488122_6202 | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.413 |
| SEW54810.1 | SEW10854.1 | SAMN04488122_6202 | SAMN04488122_0638 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Methyltransferase domain-containing protein. | 0.577 |
| SEW54810.1 | SEW53801.1 | SAMN04488122_6202 | SAMN04488122_5689 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine. | 0.413 |
| SEW54810.1 | gcvP | SAMN04488122_6202 | SAMN04488122_6125 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.723 |
| bioB | SEW10854.1 | SAMN04488122_5341 | SAMN04488122_0638 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Methyltransferase domain-containing protein. | 0.438 |
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