STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW14618.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase. (258 aa)    
Predicted Functional Partners:
SEW00499.1
Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.978
SEW14559.1
PAS domain S-box-containing protein.
  
 0.976
SEW53703.1
PAS domain S-box-containing protein.
   
 0.976
SEW35594.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.974
SEW27020.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.971
SEW54268.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.971
SEW10545.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.962
SEW13221.1
Signal transduction histidine kinase.
   
 0.961
SEW38666.1
PAS domain S-box-containing protein.
   
 0.961
SEW53043.1
Signal transduction histidine kinase.
  
 0.960
Your Current Organism:
Chitinophaga arvensicola
NCBI taxonomy Id: 29529
Other names: ATCC 51264, C. arvensicola, CIP 104804, Cytophaga arvensicola, DSM 3695, IAM 12650, JCM 2836, NBRC 14973, strain M64
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