STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW19566.1SusD family protein. (484 aa)    
Predicted Functional Partners:
SEW19585.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.936
SEW55212.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.816
SEW53467.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.812
SEW55208.1
Susd and RagB outer membrane lipoprotein.
  
 
   0.811
SEW31895.1
Protein of unknown function.
  
  0.806
SEW51693.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.782
SEW35253.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.771
SEW29821.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.764
SEW52778.1
Protein of unknown function.
  
 
   0.759
SEW50181.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.758
Your Current Organism:
Chitinophaga arvensicola
NCBI taxonomy Id: 29529
Other names: ATCC 51264, C. arvensicola, CIP 104804, Cytophaga arvensicola, DSM 3695, IAM 12650, JCM 2836, NBRC 14973, strain M64
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.