STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW52542.1Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (476 aa)    
Predicted Functional Partners:
SEW53043.1
Signal transduction histidine kinase.
  
0.982
SEW14559.1
PAS domain S-box-containing protein.
0.981
SEW52543.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.979
SEW12507.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
  0.977
SEW00073.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
  0.975
SEW42896.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
0.969
SEW53703.1
PAS domain S-box-containing protein.
0.968
SEV98344.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.960
SEW42506.1
PAS domain S-box-containing protein.
 
0.944
SEW41071.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.932
Your Current Organism:
Chitinophaga arvensicola
NCBI taxonomy Id: 29529
Other names: ATCC 51264, C. arvensicola, CIP 104804, Cytophaga arvensicola, DSM 3695, IAM 12650, JCM 2836, NBRC 14973, strain M64
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