Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV99888.1 | SEW52968.1 | SAMN04488122_0134 | SAMN04488122_5269 | Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein. | 0.434 |
SEW13523.1 | SEW52968.1 | SAMN04488122_0773 | SAMN04488122_5269 | Hypothetical protein; Manually curated. | Hypothetical protein. | 0.536 |
SEW30592.1 | SEW52968.1 | SAMN04488122_1716 | SAMN04488122_5269 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | Hypothetical protein. | 0.458 |
SEW30592.1 | SEW54602.1 | SAMN04488122_1716 | SAMN04488122_6088 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | Methyltransferase domain-containing protein. | 0.750 |
SEW42798.1 | SEW52968.1 | SAMN04488122_3143 | SAMN04488122_5269 | TonB-dependent Receptor Plug Domain. | Hypothetical protein. | 0.404 |
SEW52968.1 | SEV99888.1 | SAMN04488122_5269 | SAMN04488122_0134 | Hypothetical protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.434 |
SEW52968.1 | SEW13523.1 | SAMN04488122_5269 | SAMN04488122_0773 | Hypothetical protein. | Hypothetical protein; Manually curated. | 0.536 |
SEW52968.1 | SEW30592.1 | SAMN04488122_5269 | SAMN04488122_1716 | Hypothetical protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.458 |
SEW52968.1 | SEW42798.1 | SAMN04488122_5269 | SAMN04488122_3143 | Hypothetical protein. | TonB-dependent Receptor Plug Domain. | 0.404 |
SEW52968.1 | SEW52970.1 | SAMN04488122_5269 | SAMN04488122_5270 | Hypothetical protein. | Predicted PurR-regulated permease PerM. | 0.661 |
SEW52968.1 | SEW54602.1 | SAMN04488122_5269 | SAMN04488122_6088 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.478 |
SEW52970.1 | SEW52968.1 | SAMN04488122_5270 | SAMN04488122_5269 | Predicted PurR-regulated permease PerM. | Hypothetical protein. | 0.661 |
SEW54602.1 | SEW30592.1 | SAMN04488122_6088 | SAMN04488122_1716 | Methyltransferase domain-containing protein. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.750 |
SEW54602.1 | SEW52968.1 | SAMN04488122_6088 | SAMN04488122_5269 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.478 |