Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL27065.1 | SHL27106.1 | SAMN05444387_0189 | SAMN05444387_0190 | Protein of unknown function. | L-alanine-DL-glutamate epimerase. | 0.642 |
SHL27065.1 | SHL27152.1 | SAMN05444387_0189 | SAMN05444387_0191 | Protein of unknown function. | Hypothetical protein. | 0.494 |
SHL27065.1 | SHL49436.1 | SAMN05444387_0189 | SAMN05444387_0740 | Protein of unknown function. | Uncharacterized conserved protein. | 0.485 |
SHL27065.1 | kduI | SAMN05444387_0189 | SAMN05444387_4442 | Protein of unknown function. | 4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.489 |
SHL27065.1 | rlmF | SAMN05444387_0189 | SAMN05444387_0195 | Protein of unknown function. | 23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.595 |
SHL27106.1 | SHL27065.1 | SAMN05444387_0190 | SAMN05444387_0189 | L-alanine-DL-glutamate epimerase. | Protein of unknown function. | 0.642 |
SHL27106.1 | SHL27152.1 | SAMN05444387_0190 | SAMN05444387_0191 | L-alanine-DL-glutamate epimerase. | Hypothetical protein. | 0.550 |
SHL27152.1 | SHL27065.1 | SAMN05444387_0191 | SAMN05444387_0189 | Hypothetical protein. | Protein of unknown function. | 0.494 |
SHL27152.1 | SHL27106.1 | SAMN05444387_0191 | SAMN05444387_0190 | Hypothetical protein. | L-alanine-DL-glutamate epimerase. | 0.550 |
SHL49436.1 | SHL27065.1 | SAMN05444387_0740 | SAMN05444387_0189 | Uncharacterized conserved protein. | Protein of unknown function. | 0.485 |
kduI | SHL27065.1 | SAMN05444387_4442 | SAMN05444387_0189 | 4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Protein of unknown function. | 0.489 |
rlmF | SHL27065.1 | SAMN05444387_0195 | SAMN05444387_0189 | 23S rRNA m(6)A-1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA. | Protein of unknown function. | 0.595 |