Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL27672.1 | SHL27713.1 | SAMN05444387_0204 | SAMN05444387_0205 | Archaemetzincin. | NAD(P)H-dependent FMN reductase. | 0.773 |
SHL27672.1 | SHL27749.1 | SAMN05444387_0204 | SAMN05444387_0206 | Archaemetzincin. | Sugar phosphate isomerase/epimerase. | 0.636 |
SHL27672.1 | SHL27791.1 | SAMN05444387_0204 | SAMN05444387_0207 | Archaemetzincin. | Cupin domain-containing protein. | 0.510 |
SHL27672.1 | SHM41619.1 | SAMN05444387_0204 | SAMN05444387_2439 | Archaemetzincin. | Uncharacterized conserved protein YegJ, DUF2314 family. | 0.456 |
SHL27672.1 | SHM41796.1 | SAMN05444387_0204 | SAMN05444387_2444 | Archaemetzincin. | Suppressor of fused protein (SUFU). | 0.441 |
SHL27672.1 | trmD | SAMN05444387_0204 | SAMN05444387_0203 | Archaemetzincin. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.485 |
SHL27713.1 | SHL27672.1 | SAMN05444387_0205 | SAMN05444387_0204 | NAD(P)H-dependent FMN reductase. | Archaemetzincin. | 0.773 |
SHL27713.1 | SHL27749.1 | SAMN05444387_0205 | SAMN05444387_0206 | NAD(P)H-dependent FMN reductase. | Sugar phosphate isomerase/epimerase. | 0.636 |
SHL27713.1 | SHL27791.1 | SAMN05444387_0205 | SAMN05444387_0207 | NAD(P)H-dependent FMN reductase. | Cupin domain-containing protein. | 0.560 |
SHL27713.1 | trmD | SAMN05444387_0205 | SAMN05444387_0203 | NAD(P)H-dependent FMN reductase. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.505 |
SHL27749.1 | SHL27672.1 | SAMN05444387_0206 | SAMN05444387_0204 | Sugar phosphate isomerase/epimerase. | Archaemetzincin. | 0.636 |
SHL27749.1 | SHL27713.1 | SAMN05444387_0206 | SAMN05444387_0205 | Sugar phosphate isomerase/epimerase. | NAD(P)H-dependent FMN reductase. | 0.636 |
SHL27749.1 | SHL27791.1 | SAMN05444387_0206 | SAMN05444387_0207 | Sugar phosphate isomerase/epimerase. | Cupin domain-containing protein. | 0.616 |
SHL27749.1 | trmD | SAMN05444387_0206 | SAMN05444387_0203 | Sugar phosphate isomerase/epimerase. | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.410 |
SHL27791.1 | SHL27672.1 | SAMN05444387_0207 | SAMN05444387_0204 | Cupin domain-containing protein. | Archaemetzincin. | 0.510 |
SHL27791.1 | SHL27713.1 | SAMN05444387_0207 | SAMN05444387_0205 | Cupin domain-containing protein. | NAD(P)H-dependent FMN reductase. | 0.560 |
SHL27791.1 | SHL27749.1 | SAMN05444387_0207 | SAMN05444387_0206 | Cupin domain-containing protein. | Sugar phosphate isomerase/epimerase. | 0.616 |
SHM41619.1 | SHL27672.1 | SAMN05444387_2439 | SAMN05444387_0204 | Uncharacterized conserved protein YegJ, DUF2314 family. | Archaemetzincin. | 0.456 |
SHM41796.1 | SHL27672.1 | SAMN05444387_2444 | SAMN05444387_0204 | Suppressor of fused protein (SUFU). | Archaemetzincin. | 0.441 |
trmD | SHL27672.1 | SAMN05444387_0203 | SAMN05444387_0204 | tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | Archaemetzincin. | 0.485 |
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